CMB/BMP 450/550 Virtual Server Setup
Connect
Setup Conda
wget https://repo.anaconda.com/archive/Anaconda3-2024.06-1-Linux-x86_64.sh
chmod 755 Anaconda3-2024.06-1-Linux-x86_64.sh
./Anaconda3-2024.06-1-Linux-x86_64.sh
Welcome to Anaconda3 2024.06-1
In order to continue the installation process, please review the license
agreement.
Please, press ENTER to continue
>>> (press ENTER)
...
Do you accept the license terms? [yes|no]
>>> yes
...
Anaconda3 will now be installed into this location:
/home/cshen/anaconda3
- Press ENTER to confirm the location
- Press CTRL-C to abort the installation
- Or specify a different location below
[/home/cshen/anaconda3] >>> (press ENTER)
...
*** AT COMPLETION, DISCONNECT AND CONNECT TO CONTINUE WITH BELOW ***
Install Packages, Part 1
conda config --add channels bioconda
conda install blast hmmer fastqc trimmomatic bowtie2 raxml dfast megahit muscle prodigal
Channels:
- bioconda
- defaults
Platform: linux-64
Collecting package metadata (repodata.json): done
Solving environment: \
*** THIS WILL TAKE A LONG TIME TO RUN, APPROX 20 MINS ***
